PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID NNU_009651-RA
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Proteales; Nelumbonaceae; Nelumbo
Family ZF-HD
Protein Properties Length: 142aa    MW: 15581.8 Da    PI: 4.1423
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
NNU_009651-RAgenomeCASView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer71.61.2e-22957557
    ZF-HD_dimer  5 rYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRrev 57
                    Y+eC++NhAaslG++a+DGCgE +++     t+ +l C ACgCH nFH +  
  NNU_009651-RA  9 AYRECRHNHAASLGSYATDGCGELTTD----ETTPGLMCEACGCHHNFHQKVI 57
                   7***********************998....35689*************9986 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF047702.7E-18956IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
PROSITE profilePS5152320.5471056IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
ProDomPD1257742.0E-131055IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
TIGRFAMsTIGR015666.3E-191055IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
Sequence ? help Back to Top
Protein Sequence    Length: 142 aa     Download sequence    Send to blast
MEGDNINDAY RECRHNHAAS LGSYATDGCG ELTTDETTPG LMCEACGCHH NFHQKVIVLE  60
KEGGRGGSNT NQNHIDNNRV WDAVVVEIMD LWTTQVSSAL ETADFDISSA SDTGKFNTND  120
ERNESVIALD VLALFDRSDE QT
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010271248.15e-33PREDICTED: uncharacterized protein LOC104607317
STRINGPOPTR_0015s05220.11e-21(Populus trichocarpa)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60480.11e-15homeobox protein 26